Conferences 2014

1. 2nd Polish Interdisciplinary Symposium Inter-Mix 2014, 20-23.11.2014, Wojanów, Poland

  • Satała, G.; Badanie wpływu jonów cynku na receptory serotoninowe 5-HT7 metodami in vitro i in silico; Book of Abstracts, p.78.  Abstract
  • Kurczab, R.; Development and application of virtual screening protocol, as a tool to support the process of finding new drugs; Book of Abstracts, p.63. Abstract Poster
  • Hogendorf, A.; Development of new 5-HT6R ligand series illustrates the search for selective transmembrane protins ligands; Book of Abstracts, p.52. Abstract Poster

2. 2nd Symposium on Biotransformations for Pharmaceutical and Cosmetic Industry, 23-24.10.2014, Warsaw, Poland

  • Rugor, A.; Janeczko, T. ; Dudzik, A.; Staroń, J.; Bojarski, A.; Szaleniec, M.; Selective modifications of sterols performed by enzymes from Sterolibacterium denitrificans; Book of Abstracts, p. 40 Abstract

3. The GLISTEN Budapest 2014 Conference, 02-04.10.2014, Budapest, Hungary

  • Mordalski, S.; Bojarski, A.J.; Computational study on GPCR – G protein interfaces; Book of Abstracts, L305 Abstract
  • Rataj, K.; Witek. J.; Mordalski, S.; Bojarski, A.J.; SIFt-guided agonist/antagonist differentiation for beta2-AR ligands; Book of Abstracts, P409 Abstract Poster
  • Smusz, S.; Witek, J.; Rataj. K; Mordalski, S.; Bojarski, A.J.; Structural interaction profiles combination as a method for optimization of its application in docking results analysis – beta-2 adrenergic receptor case study; Book of Abstracts, P412 Abstract Poster
  • Warszycki, D.; Mordalski, S.; Freyd, T.; Sylte, I.; Bojarski, A.J.; Pharmacophore modeling of GABA-B receptor ligands – methodology and application for virtual screening; Book of Abstracts, P407 Abstract Poster
  • Lacivita, E.; Niso, M.; Smusz, S.; Satała, G.; Bojarski, A.J.; Leopoldo, M.; Novel potent serotonin 5-HT7 receptor ligands: structural modification to improve pharmacokinetic properties and in silico prediction model; Book of Abstracts, P408 Abstract
  • Kucwaj-Brysz, K.;Warszycki, D.; Witek, J.; Smusz, S.; Satała, G.; Bojarski, A.J.; Handzlik, J.; Kieć-Kononowicz, K.; Hydantoin derivatives as selective serotonin 5-HT7 receptor ligands; Book of Abstracts, P416 Abstract
  • Fidom, K.; Isberg, V.; Hauser, A.S.; Mordalski, S.; Lehto, T.; Bojarski, A.J.; Gloriam, D.E.; A new crystal structure fragment-based pharmacophore method for GPCRs; Book of Abstracts, PG01 Abstract
  • Isberg, V.; Vroling, B.; Mordalski, S.; Hauser, A.; van der Kant, R.; Vriend, G.; Gloriam, D.E.; GPCRDB: GPCR data, diagrams and tools; Book of Abstracts, PG02 Abstract
  • Isberg, V.; Mordalski, S.; Vriend, G.; Gloriam, D. E.; Generic G protein-coupled receptor residue numbering-aligning topology maps while minding the gaps; Book of Abstracts, PG03 Abstract

4. The Schrödinger 14th Annual European User Meeting, 29.09-01.10.2014, Frankfurt, Germany

  • Fidom, K.; Isberg, V.; Mordalski, S.; Hauser, A.; Lehto, T.; ; Bojarski, A.J.; Gloriam, D.E.; A new crystal strycture fragment-based pharmacophore method for G Protein-Coupled receptors; Book of Abstracts, p. 84 Abstract
  • Isberg, V.; Vroling, B.; Mordalski, S.; Hauser, A.; van der Kant, R.; Vriend, G.; Gloriam, D. E.; GPCRDB: GPCR Data, Diagram and Tools; Book of Abstracts, p. 88 Abstract

5. 8th International Meeting on Metabotropic Glutamate Receptors, 29.09-03.10.2014, Taormina, Italy

  • Brański, P.; Hogendorf, A.; Burnat, G.; Bojarski, A.J.; Chruścicka,B.; Bugno, R.; Pilc, A.; IP27039 a novel nonselective mGluR8 agonist? Book of Abstracts, p. 24

6. VIth Conversatory on Medicinal Chemistry, 18-20.09.2014, Lublin, Poland

  • Hogendorf, A.; Satała, G.; Staroń, J.; Warszycki, D.; Hogendorf, A; Bugno, R.; Bojarski, A.J.; Systematic study reveals new potent and selective 5-HT6R ligands based on indole scaffold; Book of Abstracts, p. 21 Abstract
  • Staroń, J.; Warszycki, D.; Kalinowska-Tłuścik, J.; Satała, G.; Bojarski, A.J.; Bioisosteric substitution of sulphonyl group in 5-HT6R ligands – a study on ligand-receptor interactions; Book of Abstracts, p. 36 Abstract
  • Bugno, R.; Paluchowska, M.; Kozioł, A.; Satała, G.; Kos, T.; Nikiforuk, A.; Popik, P.; Bojarski, A.J.; Synthesis of novel group of multireceptoral ligands with antipsychotic and pro-cognitive properties; Book of Abstracts, p. 75 Abstract Poster
  • Mordalski, S.; Bojarski, A.J.; 2D-SIFt – a matrix describing ligand-receptor interactions; Book of Abstracts, p. 121 Abstract Poster
  • Rataj, K.; Czarnecki, W.; Smusz, S.; Bojarski, A.J.; 2-Dimensional substructural fingerprints – a novel method of compound structure representation; Book of Abstracts, p. 148 Abstract Poster
  • Satała, G.; Duszyńska, B.; Bojarski, A.J.; Pharmacological characterization of zinc interaction with 5-HT7; Book of Abstracts, p. 153 Abstract Poster
  • Warszycki, D.; Staroń, J.; Kafel, R.; Bojarski, A.J.; Lessons learned from analysis of bioisosteric substitution in ligands of serotonin receptor family; Book of Abstracts, p. 188 Abstract Poster
  • Witek, J.; Smusz, S.; Rataj, K.; Mordalski, S.; Bojarski, A.J.; Combination of structural interaction profiles as a method for optimization of its application in docking results analysis; Book of Abstracts, p. 157 Abstract Poster
  • Stefański, T.; Kurczab, R.; Dutkiewicz, Z.; Mikstacka, R.; Cichocki, M.; Murias, M.; Gielara-Korzańska, A.; Sobiak, S.; Design, synthesis and biological evaluation of novel combrestatatin A-4 derivatives – potential antimitotic agents; Book of Abstracts, p. 163-164 Abstract
  • Żesławska, E.; Handzlik, J.; Nitek, W.; Satała, G.; Bojarski, A.J.; Siwek, A.; Kieć-Kononowicz, K.; Crystal and molecular structure of the phenylpiperazine derivative of 5-methyl-5-phenylhydantoin with activities towards GPCRs: alfa1-adrenergic/serotonin 5-HT1A and 5-HT7; Book of Abstracts, p. 206 Abstract
  • Kucwaj-Brysz, K.; Warszycki, D.; Smusz, S.; Witek, J.; Satała, G.; Bojarski, A.J.; Handzlik, J.; Kieć-Kononowicz, K.; The structure-selectivity relationship studies for hydantoin-derived 5-HT7R ligands; Book of Abstracts, p. 103 Abstract
  • Canale, V.; Partyka, A.; Satała, G.; Wasik, A.; Pawłowski, M.; Bojarski, A.J.; Wesołowska, A.; Zajdel, P.; Arylsulfonamide analogs of PZ-766 as potent 5-HT7 receptor antagonists, Book of Abstacts, p. 201 Abstract

7. XXV Congresso Nazionale della Societa Chimica Italiana, 07-12.09.2014, Arcavacata di Rende, Italy

  • Lacivita, E.; Niso, M.; Smusz, S.; Satała, G.; Perrone, R.; Bojarski, A.J.; Leopoldo, M.; Towards metabolically stable serotonin 5-HT7 receptor ligands: structural modification of LP-211 and in silico prediction model, Book of Abstracts, p. 359 Abstract

8. The XXIII International Symposium on Medicinal Chemistry (EFMC-ISMC 2014), 07-11.09.2014, Lisbon, Portugal

  • Staroń, J.; Warszycki, D.; Kalinowska-Tłuścik, J.; Satała, G.; Bojarski, A.J.; Investigation of Ligand Binding Mode at 5-HT6R with the Use of Bioisosterism; Book of Abstracts, p. 129 Abstract Poster

9. 7th International Congress on Biocatalysis, 31.08-04.09. 2014, Hamburg, Germany

  • Rugor, A.; Dudzik, A.; Tataruch, M.; Staroń, J.; Bojarski, A.; Szaleniec, M.; Application Potential of steroid C25 Dehydrogenase from Sterolibacterium Denitrificans; Book of Abstracts, p. 133 Abstract

10. The 5th Annual BioStruct Conference, 28–31.08.2014, Jægtvolden, Norway

  • Freyd, T.; Warszycki, D.; Gabrielsen, M.; Kristiansen, K.; Chilmonczyk, Z.; Bojarski, A.J.; Sylte, I.; Allosteric modulation of the human GABAB receptor: Development of a tool for antidepressant drug discovery, Book of Abstracts, p. 22 Abstract

11. The 9th FENS Forum of Neuroscience, 05-09.07.2014, Milan, Italy

  • Kos, T.; Zajdel, P.; Nikiforuk, A.; Bojarski, A.J.; Popik, P.; PZ-976, a novel potential antipsychotic and cognition-enhancing compound; Book of Abstracts, C110.

12. 50th International Conference on Medicinal Chemistry, 02-04.07.2014, Rouen, Normandy, France

  • Deau, E.; Voinea, R.; Morisset-Lopez, S.; Robin, E.; Tamagnan, G.; Algille, D.; Bojarski, A.J.; Finaru, A.; Suzenet, F.; Guillaumet, G.; Targeting 5-HT7 receptor in primate brain by [18F]-pet imaging: Identification and radiolabeling of a novel highly selective serotoninergic ligand; Book of Abstracts

13. Modeling & Design of Molecular Materials 2014, 29.06-03.07.2014, Kudowa Zdrój, Poland

  • Rugor, A.; Wójcik, A.; Mordalski, S.; Bojarski, A.; Szaleniec, M.; Structural modelling of a novel molybdoenzyme: steroid C25 dehydrogenase from Sterolibacterium denitrificans, Book of abstracts, p.P58B Abstract

14. Global Biotechnology Congress, 16-19.06.2014, Boston MA, USA

  • Rugor, A.; Dudzik, A.; Zawada, N.; Mordalski, S.; Staroń, J.; Bojarski, A.; Szaleniec, M.; Experimental and theoretical studies on steroid C25 dehydrogenase from Sterolibacterium denitrificans; Book of Abstracts, p.296.Abstract

15. International Psychiatric Conference, 05-07.06.2014, Warsaw, Poland

  • Kusmierczyk, J.; Chmielarz, P.; Kowalska, M.; Chruscicka, B.; Roman, A.; Paluchowska, M.; Nalepa, I.; Functional analysis of drug-receptor interaction: study of clinically used and novel antipsychotics; Book of Abstracts, p. 85 Abstract

16. BioInformatics in Torun – BIT14, 12-14.06.2014, Toruń, Poland

  • Bojarski, A.J; Virtual screening in the identification of novel ligands of several GPCR targets; Book of Abstracts, p. 13 Abstract

17.  The 10th International Conference on Chemical Structures, 1-5.06.2014, Noordwijkerhout, the Netherlands

  • Warszycki, D.; Staroń, J.; Kafel, R.; Bojarski, A.J.; Comprehensive analysis of bioisosteric replacement in ligands of a serotonin receptors family; Book of Abstracts, p.90 Abstract
  • Smusz, S.; Mordalski, S.; Witek, J.; Rataj, K.; Bojarski, A.J.; A machine learning-based for docking results analysis; Book of Abstracts, p.143 Abstract
  • Kurczab, R.; Dutkiewicz, Z.; Stefański, T.; Mikstacka, R.; Sobiak, S.; ldentification of novel tubulin inhibitors by parallel virtual screening protocol of reaction-based combinatorial library of combretastatin CA-4 derivatives; Book of Abstracts, p.162 Abstract

18. IV Konferencja Doktorantów Uniwersytetu Jagiellońskiego – Collegium Medicum, 29-30.05.2014, Kraków, Poland

  • Smusz, S.; Witek, J.; Matys, A.; Handzlik, J.; Bojarski, A.J; Kieć-Kononowicz, K.; Wyjaśnienie mechanizmu znoszenia lekooporności przez pochodne 5-arylidenoimidazolonu za pomocą metod modelowania molekularnego, Zeszyty Naukowe Towarzystwa Doktorantów Uniwersytetu Jagiellońskiego, Numer 8 (1/2014), Anna Bogdala, Bartłomiej Jałocha, Ed.,  e-ISSN 2082-3827, p-ISSN 2084-977X, str. 30 Abstract
  • Canale, V.; Partyka, A.; Satała, G.; Kurczab, R.; Wasik, A.; Pawłowski, M.; Bojarski, A.J.; Wesołowska, A.; Zajdel, P.; Arylosulfonamidowe pochodne aryloksy-/arylotio-etylo amin alicyklicznych jako nowa grupa antagonistów receptorów 5-HT7, Zeszyty Naukowe Towarzystwa Doktorantów Uniwersytetu Jagiellońskiego, Numer 8 (1/2014), Anna Bogdala, Bartłomiej Jałocha, Ed.,  e-ISSN 2082-3827, p-ISSN 2084-977X, str. 51 Abstract
  • Dela, A.; Duszyńska, B.; Satała, G.; Handzlik, J.; Bojarski, A.J.; Kieć-Kononowicz, K.; Wpływ modyfikacji strukturalnych w grupie arylidenowych pochodnych fenylopiperazyny na powinowactwo do receptorów 5HT1A i 5HT7 serotoninowych, Zeszyty Naukowe Towarzystwa Doktorantów Uniwersytetu Jagiellońskiego, Numer 8 (1/2014), Anna Bogdala, Bartłomiej Jałocha, Ed.,  e-ISSN 2082-3827, p-ISSN 2084-977X, str. 55 Abstract
  • Kucwaj-Brysz, K.; Warszycki, D.; Satała, G.; Bojarski, A.J.; Handzlik, J.; Kieć-Kononowicz, K.; Poszukiwanie selektywnych ligandów receptora serotoninowego 5-HT7 pośród aminoalkilowych pochodnych hydantoiny, Zeszyty Naukowe Towarzystwa Doktorantów Uniwersytetu Jagiellońskiego, Numer 8 (1/2014), Anna Bogdala, Bartłomiej Jałocha, Ed.,  e-ISSN 2082-3827, p-ISSN 2084-977X, str. 118 Abstract

19. GPCR Structure, Function and Drug Discovery Conference, 19-26.05.2014, Cambridge, USA

  • Freyd, T.; Warszycki, D.; Gabrielsen, M.; Mordalski, S.; Kristiansen, K.; Chilmonczyk, Z.; Bojarski, A.J.; Sylte, I.; Allosteric modulation of the human GABA B receptor, Book of Abstracts Abstract
20. 10th Polish User Group Meeting, 20-21.05.2014, Warsaw, Poland
  • Rataj, K.; The Discovery Studio software in homology modeling.
21. The Ninth Multidisciplinary Conference on Drug Research, 12-14.05.2014, Szydłów, Poland
  • Chilmonczyk, Z; Sylte, I. Bojarski, A.J.; Ligand-directed receptor trafficking; Book of Abstracts, p. 7 Abstract
  • Staron, J.; Warszycki, D.; Kalinowska-Tłuścik, J.; Satała, G.; Bojarski, A.J.; Rational design and synthesis of new 5-HT6R ligands with the use of bioisosteric strategies. Crystal structures, biological evaluation and molecular modeling studies; Book of Abstracts, p. 65 Abstract
  • Walory, J.; Sylte, I.; Bojarski, A.J.; Nowak, G; Chilmończyk, Z.; Serotonin transporter inhibitors inducing hypotermia at mice; Book of Abstracts, p. 70 Abstract

22. Barcelona GPCR Spring Conference 2014, 28-30.04.2014, Barcelona, Spain

  • Warszycki, D.; Rueda, M.; Kristiansen, K.; Sylte, I.; Abagyan, R.; Bojarski, A.J.; Ligand binding mode analysis using new 5-HT1A receptor models developed by ALiBERO methodology; Book of Abstracts, p. 23. Poster
  • Witek, J.; Smusz, S.; Rataj, K.; Mordalski, S.; Bojarski, A.J.; An application of ligand interaction profiles as a novel approach in virtual screening of GPCR ligands; Book of Abstracts, p. 26 Poster
  • Mordalski, S.; Bojarski, A.J.; 2D-SIFt – a matrix describing detailed interactions between ligand and receptor; Book of Abstracts, p. 31 Poster
  • Smusz, S.; Czarnecki, W.; Warszycki, D.; Bojarski, A.J.; Uncertainty of the in vitro experiments in the predictive models construction, Book of Abstracts, p. 32 Poster
  • Rataj, K.; Czarnecki, W.; Smusz, S.; Bojarski, A.J.; 2D fingerprints – a new way of chemical structure description, Book of Abstracts, p. 31 Poster

23. Neuronus 2014 IBRO & IRUN Neuroscience Forum, 25-27.04.2014, Kraków, Poland

  • Hogendorf, A.; Synthesis and evaluation of new indole derivatives as aminergic GPCR ligands Abstract

24. Dokonania Naukowe Doktorantów II Edycja, 12.04.2014, Kraków, Poland

  • Smusz, S.; Protokół do automatycznej oceny wyników dokowania oparty o metody uczenia maszynowego; Book of Abstracts, p. 227 (ISBN 978-83-63058-40-1) Abstract

25. XLVI Ogólnopolskie Kolokwium Katalityczne, 2014.03.19-21 Kraków, Poland

  • Rugor, A.; Dudzik, A.; Zawada, N.; Mordalski, S.; Staroń, J.; Bojarski, A.; Szaleniec, M.; Badania nad strukturą i aktywnośącią  katalityczną Dehydrogenazy C25 steroidowej z Sterolibacterium Denitrificans; Book of Abstracts, p.64 Abstract

26. Society of Applied Neuroscience & National Initiative Brain & Cognition, 30.01-02.02.2014, Ulchrecht, the Netherlands

  • Chilmonczyk, Z.; Walory, J.; Bojarski, A.J. Sylte, I.; Nowak, G.; Szewczyk, B.; Zinc and depression. Modulation of serotonergic neurotransmission by zince at a cellular level, Book of Abstracts Abstract